Sylvain Moineau Ph.D.
Professeur titulaire

Département de biochimie, de microbiologie et de bio-informatique
Faculté des sciences et de génie
Pavillon Alexandre-Vachon
1045 avenue de la Médecine, Université Laval
Québec, Canada, G1V 0A6
Tel: 418 656-3712
Fax: 418 656-2861
Courriel: sylvain.moineau@bcm.ulaval.ca

1991-2026

  1. Marangon, A.M., S.A. Pujato, G.M. Rousseau, D.M. Tremblay, G.A. Lugli, M. Ventura, J. Mahony, S. Moineau, A. Quiberoni, and D.M. Guglielmotti. 2026. Temporal dynamics of the S. thermophilus phage population in a yogurt production facility. Int. J. Food Microbiol. Accepté
  2. Morency C, Rousseau GM, Morneau Z, Moineau S. 2026. Phage satellites induced by virulent phages are mobilized by natural competence leading to phage resistance in a new host. Nat Commun doi:10.1038/s41467-026-72928-1. Abstract
  3. Leprince A, Somerville V, Addablah AA, Morency C, Moineau S. 2026. Phage host range: determinants, dynamics and applications. Nat Rev Microbiol doi:10.1038/s41579-026-01306-x. Abstract
  4. Byatt G, Goffard C, Cornuault JK, Lemieux M, De Koninck P, Paquet ME, Moineau S. 2026. Optimization of bacterial colonization in the gut of axenic and conventional zebrafish larvae using live food. Microbiol Spectr doi:10.1128/spectrum.02853-25:e0285325. Abstract
  5. Mejia Bohorquez B, Vincent T, Tremblay D, Moineau S, Garnier A. 2026. Identification of chalcopyrite-binding peptides for flotation applications using phage display and deep sequencing. J Biotechnol 414:8-18. Abstract
  6. Makarova KS, Shmakov SA, Wolf YI, Mutz P, Altae-Tran H, Beisel CL, Brouns SJJ, Charpentier E, Cheng D, Doudna J, Haft DH, Horvath P, Moineau S, Mojica FJM, Pausch P, Pinilla-Redondo R, Shah SA, Siksnys V, Terns MP, Tordoff J, Venclovas Č, White MF, Yakunin AF, Zhang F, Garrett RA, Backofen R, van der Oost J, Barrangou R, Koonin EV. 2025. An updated evolutionary classification of CRISPR-Cas systems including rare variants. Nat Microbiol 10:3346-3361. Abstract
  7. Leprince A, Lefrançois J, Millen AM, Magill D, Horvath P, Romero DA, Rousseau GM, Moineau S. 2025. Strengthening phage resistance of Streptococcus thermophilus by leveraging complementary defense systems. Nat Commun 16:7142. Résumé
  8. Scarrone M, Turner D, Wittmann J, Rohde C, Labrie SJ, Tremblay DM, Moineau S. 2025. Complete genome of five Acinetobacter baumannii phages. Microbiol Resour Announc 14:e0046325. Résumé
  9. Leprince A, Moineau S. 2025. CRISPR-Cas in the Cheese Industry. Annu Rev Virol doi:10.1146/annurev-virology-092623-111016. Résumé
  10. Fremaux, C., P. Horvath, A. Cochu-Blachère, D. Romero, S. Moineau, ans S. Labrie. 2025. Lactic acid bacterium with a reduction of sensitivity to cos-type bacteriophages. US Patent 12,268,219. Résumé
  11. Scarrone M, Turner D, Dion M, Tremblay D, Moineau S. 2025. In silico and in vitro comparative analysis of 79 Acinetobacter baumannii clinical isolates. Microbiol Spectr doi:10.1128/spectrum.02849-24:e0284924. Résumé
  12. Zhang Y, Castro-Mejía JL, Deng L, Shah SA, Thorsen J, Leal Rodríguez C, Jessen LE, Dion MB, Chawes B, Bønnelykke K, Sørensen SJ, Bisgaard H, Moineau S, Petit MA, Stokholm J, Nielsen DS. 2025. The influence of early life exposures on the infant gut virome. Gut Microbes 17:2501194. Résumé
  13. Mosterd C, Moineau S. 2025. Insight into crRNA Processing in Streptococcus mutans P42S and Application of SmutCas9 in Genome Editing. Int J Mol Sci 26. Résumé
  14. Pitot TM, Girard C, Rapp JZ, Somerville V, Culley AI, Vincent WF, Moineau S, Roux S. 2025. Viral niche-partitioning: comparative genomics of giant viruses across environmental gradients in a high Arctic freshwater-saltwater lake. ISME Commun 5:ycae155. Résumé
  15. Fort C, Bareha Y, Pham TTH, Lai TT, Brouillette F, Njamen G, Tolnai B, Moineau S, Barnabe S. 2025. Lifespan and bioactivity improvement of bacteriophages immobilized on carboxymethylcellulose - Cationic starch-coated paper for food packaging. Int. J. Biol. Macromol. 294:139138. Résumé
  16. Resch G, Brives C, Debarbieux L, Hodges FE, Kirchhelle C, Laurent F, Moineau S, Martins AFM, Rohde C. 2024. Between Centralization and Fragmentation: The Past, Present, and Future of Phage Collections. PHAGE 5:22-29. Résumé
  17. Morneau Z, Moineau S. 2024. The double play of a phage HTH regulator. Trends Microbiol 2024 Sep 25:S0966-842X(24)00231-2. Résumé
  18. Addablah AA, Ngazoa-Kakou SE, Adioumani EA, Labrie SJ, Tremblay DM, Gunathilake D, Moineau S. 2024. Complete genome of Escherichia phages Carena and JoYop. Microbiol Resour Announc 13:e0123323. Résumé
  19. Dion MB, Shah SA, Deng L, Thorsen J, Stokholm J, Krogfelt KA, Schjørring S, Horvath P, Allard A, Nielsen DS, Petit MA, Moineau S. 2024. Escherichia coli CRISPR arrays from early life fecal samples preferentially target prophages. ISME J 18. Résumé
  20. Gandon S, Guillemet M, Gatchitch F, Nicot A, Renaud AC, Tremblay DM, Moineau S. 2024. Building pyramids against the evolutionary emergence of pathogens. Proc Biol Sci 291:20231529. Résumé
  21. Oechslin F, Zhu X, Morency C, Somerville V, Shi R, Moineau S. 2024. Fermentation Practices Select for Thermostable Endolysins in Phages. Mol Biol Evol 41. Résumé
  22. de Melo AG, Morency C, Moineau S. 2024. Virulence-associated factors as targets for phage infection. Curr Opin Microbiol 79:102471. Résumé
  23. Hosseini N, Chehreghani M, Moineau S, Charette SJ. 2024. Centroid of the bacterial growth curves: a metric to assess phage efficiency. Commun Biol 7:673. Résumé
  24. Bayat F, Hilal A, Thirugnanasampanthar M, Tremblay D, Filipe CDM, Moineau S, Didar TF, Hosseinidoust Z. 2024. High throughput platform technology for rapid target identification in personalized phage therapy. Nat Commun 15:5626. Résumé
  25. Gunathilake KMD, Makumi A, Loignon S, Tremblay D, Labrie S, Svitek N, Moineau S. 2024. Diversity of Salmonella enterica phages isolated from chicken farms in Kenya. Microbiol Spectr 12:e0272923. Résumé
  26. Leal Rodriguez C, Shah SA, Rasmussen MA, Thorsen J, Boulund U, Pedersen CT, Castro-Mejia JL, Poulsen CE, Poulsen CS, Deng L, Larsen FAN, Widdowson M, Zhang Y, Sorensen SJ, Moineau S, Petit MA, Chawes B, Bonnelykke K, Nielsen DS, Stokholm J. 2024. The infant gut virome is associated with preschool asthma risk independently of bacteria. Nat Med doi:10.1038/s41591-023-02685-x. Résumé
  27. Pastuszka A, Rousseau GM, Somerville V, Levesque S, Fiset JP, Goulet A, Doyon Y, Moineau S. 2023. Dairy phages escape CRISPR defence of Streptococcus thermophilus via the anti-CRISPR AcrIIA3. Int J Food Microbiol 407:110414. Résumé
  28. Philippe C, Cornuault JK, de Melo AG, Morin-Pelchat R, Jolicoeur AP, Moineau S. 2023. The never-ending battle between lactic acid bacteria and their phages. FEMS Microbiol Rev 47. Résumé
  29. Hosseini N, Paquet VE, Marcoux PE, Alain CA, Paquet MF, Moineau S, Charette SJ. 2023. MQM1, a bacteriophage infecting strains of Aeromonas salmonicida subspecies salmonicida carrying Prophage 3. Virus Res 334:199165. Résumé
  30. de Melo AG, Lemay ML, Moineau S. 2023. The impact of Brevibacterium aurantiacum virulent phages on the production of smear surface-ripened cheeses. Int J Food Microbiol 400:110252. Résumé
  31. Jolicoeur AP, Lemay ML, Beaubien E, Bélanger J, Bergeron C, Bourque-Leblanc F, Doré L, Dupuis M, Fleury A, Garneau JE, Labrie SJ, Labrie S, Lacasse G, Lamontagne-Drolet M, Lessard-Hurtubise R, Martel B, Menasria R, Morin-Pelchat R, Pageau G, Samson JE, Rousseau GM, Tremblay DM, Duquenne M, Lamoureux M, Moineau S. 2023. Longitudinal Study of Lactococcus Phages in a Canadian Cheese Factory. Appl Environ Microbiol doi:10.1128/aem.00421-23:e0042123. Résumé
  32. Alizadeh Sahraei A, Mejia Bohorquez B, Tremblay D, Moineau S, Garnier A, Larachi F, Lagüe P. 2023. Insight into the Binding Mechanisms of Quartz-Selective Peptides: Toward Greener Flotation Processes. ACS Appl Mater Interfaces 15:17922-17937. Résumé
  33. Campbell ZA, Njiru N, Mhone AL, Makumi A, Moineau S, Svitek N. 2023. Gender-Responsive Design of Bacteriophage Products to Enhance Adoption by Chicken Keepers in Kenya. Viruses 15. Résumé
  34. Shah SA, Deng L, Thorsen J, Pedersen AG, Dion MB, Castro-Mejía JL, Silins R, Romme FO, Sausset R, Jessen LE, Ndela EO, Hjelmsø M, Rasmussen MA, Redgwell TA, Leal Rodríguez C, Vestergaard G, Zhang Y, Chawes B, Bønnelykke K, Sørensen SJ, Bisgaard H, Enault F, Stokholm J, Moineau S, Petit MA, Nielsen DS. 2023. Expanding known viral diversity in the healthy infant gut. Nat Microbiol doi:10.1038/s41564-023-01345-7. Résumé
  35. Rasmussen TS, Koefoed AK, Deng L, Muhammed MK, Rousseau GM, Kot W, Sprotte S, Neve H, Franz C, Hansen AK, Vogensen FK, Moineau S, Nielsen DS. 2023. CRISPR-Cas provides limited phage immunity to a prevalent gut bacterium in gnotobiotic mice. ISME J 17:432-442. Résumé
  36. Nielsen TK, Forero-Junco LM, Kot W, Moineau S, Hansen LH, Riber L. 2023. Detection of nucleotide modifications in bacteria and bacteriophages: Strengths and limitations of current technologies and software. Mol Ecol doi:10.1111/mec.16679. Résumé
  37. Kejzar N, Laanto E, Rissanen I, Abrishami V, Selvaraj M, Moineau S, Ravantti J, Sundberg LR, Huiskonen JT. 2022. Cryo-EM structure of ssDNA bacteriophage ΦCjT23 provides insight into early virus evolution. Nat Commun 13:7478. Résumé
  38. Lai TT, Pham TTH, van Lingen M, Desaulniers G, Njamen G, Tolnai B, Jabrane T, Moineau S, Barnabé S. 2022. Development of Antimicrobial Paper Coatings Containing Bacteriophages and Silver Nanoparticles for Control of Foodborne Pathogens. Viruses 14. Résumé
  39. Xavier ADS, de Melo AG, Hendrich CG, Tremblay DM, Rousseau GM, Plante PL, Forest KT, Alfenas-Zerbini P, Allen C, Moineau S. 2022. In through the Out Door: A Functional Virulence Factor Secretion System Is Necessary for Phage Infection in Ralstonia solanacearum. mBio 13:e0147522. Résumé
  40. Mhone AL, Makumi A, Odaba J, Guantai L, Gunathilake KMD, Loignon S, Ngugi CW, Akhwale JK, Moineau S, Svitek N. 2022. Salmonella Enteritidis Bacteriophages Isolated from Kenyan Poultry Farms Demonstrate Time-Dependent Stability in Environments Mimicking the Chicken Gastrointestinal Tract. Viruses 14. Résumé
  41. Philippe C, Morency C, Plante PL, Zufferey E, Achigar R, Tremblay DM, Rousseau GM, Goulet A, Moineau S. 2022. A truncated anti-CRISPR protein prevents spacer acquisition but not interference. Nat Commun 13:2802. Résumé
  42. Oechslin F, Zhu X, Dion MB, Shi R, Moineau S. 2022. Phage endolysins are adapted to specific hosts and are evolutionarily dynamic. PLoS Biol 20:e3001740. Résumé
  43. Mhone AL, Makumi A, Odaba J, Guantai L, Gunathilake KMD, Loignon S, Ngugi CW, Akhwale JK, Moineau S, Svitek N. 2022. Salmonella Enteritidis Bacteriophages Isolated from Kenyan Poultry Farms Demonstrate Time-Dependent Stability in Environments Mimicking the Chicken Gastrointestinal Tract. Viruses 14. Résumé
  44. Gunathilake KMD, Tremblay DM, Plante PL, Jensen EC, Nickerson KW, Moineau S. 2022. Genome Sequence of SN1, a Bacteriophage That Infects Sphaerotilus natans and Pseudomonas aeruginosa. Microbiol Resour Announc 11:e0047822. Résumé
  45. Guillemet M, Chabas H, Nicot A, Gatchich F, Ortega-Abboud E, Buus C, Hindhede L, Rousseau GM, Bataillon T, Moineau S, Gandon S. 2022. Competition and coevolution drive the evolution and the diversification of CRISPR immunity. Nat Ecol Evol doi:10.1038/s41559-022-01841-9. Résumé
  46. Billaud M, Lamy-Besnier Q, Lossouarn J, Moncaut E, Dion MB, Moineau S, Traoré F, Le Chatelier E, Denis C, Estelle J, Achard C, Zemb O, Petit MA. 2021. Analysis of viromes and microbiomes from pig fecal samples reveals that phages and prophages rarely carry antibiotic resistance genes. ISME Commun 1. Résumé
  47. Hosseini N, Paquet VE, Chehreghani M, Moineau S, Charette SJ. 2021. Phage Cocktail Development against Aeromonas salmonicida subsp. salmonicida Strains Is Compromised by a Prophage. Viruses 13. Résumé
  48. Cornuault JK, Byatt G, Paquet ME, De Koninck P, Moineau S. 2021. Zebrafish: a big fish in the study of the gut microbiota. Curr Opin Biotechnol. 73:308-313. Résumé
  49. Cornuault JK, Moineau S. 2021. Induction and Elimination of Prophages Using CRISPR Interference. CRISPR J. 4:549-557. Résumé
  50. Mosterd C, Moineau S. 2021. Primed CRISPR-Cas Adaptation and Impaired Phage Adsorption in Streptococcus mutans. mSphere. 6:e00185-21. Résumé
  51. Pastuszka A, Beauruelle C, Camiade E, Rousseau GM, Moineau S, Mereghetti L, Horvath P, Lanotte P. 2021. Functional Study of the Type II-A CRISPR-Cas System of Streptococcus agalactiae Hypervirulent Strains. CRISPR J. 4:233-242. Résumé
  52. Doré L, Pageau G, Bourque-Leblanc F, Dupuis MÈ, Lessard-Hurtubise R, Lacasse G, Plante PL, Labrie S, P Jolicoeur A, Rousseau GM, Tremblay DM, Moineau S. 2021. Complete Genome Sequences of 10 Lactococcal Skunavirus Phages Isolated from Cheddar Cheese Whey Samples in Canada. Microbiol Resour Announc. 10:e00098-21. Résumé
  53. Achigar R, Scarrone M, Rousseau GM, Philippe C, Machado F, Duvós V, Campot MP, Dion MB, Shao Y, Pianzzola MJ, Moineau S. 2021. Ectopic Spacer Acquisition in Streptococcus thermophilus CRISPR3 Array. Microorganisms. 9:512. Résumé
  54. Hoikkala V, Ravantti J, Díez-Villaseñor C, Tiirola M, Conrad RA, McBride MJ, Moineau S, Sundberg LR. 2021. Cooperation between Different CRISPR-Cas Types Enables Adaptation in an RNA-Targeting System. mBio. 12:e03338-20. Résumé
  55. Jungblut AD, Raymond F, Dion MB, Moineau S, Mohit V, Nguyen GQ, Déraspe M, Francovic-Fontaine É, Lovejoy C, Culley AI, Corbeil J, Vincent WF. 2021. Genomic diversity and CRISPR-Cas systems in the cyanobacterium Nostoc in the High Arctic. Environ Microbiol. 23:2955-2968. Résumé
  56. Dion MB, Plante PL, Zufferey E, Shah SA, Corbeil J, Moineau S. 2021. Streamlining CRISPR spacer-based bacterial host predictions to decipher the viral dark matter. Nucleic Acids Res. 49:3127-3138. Résumé
  57. Philippe C, Moineau S. 2021. The endless battle between phages and CRISPR-Cas systems in Streptococcus thermophilus. Biochem Cell Biol doi:10.1139/bcb-2020-0593. Résumé
  58. Mosterd C, Rousseau GM, Moineau S. 2021. A short overview of the CRISPR-Cas adaptation stage. Can J Microbiol 67:1-12. Résumé
  59. Fage C, Lemire N, Moineau S. 2020. Delivery of CRISPR-Cas systems using phage-based vectors. Curr Opin Biotechnol 68:174-180. Résumé
  60. Yousfi K, Usongo V, Berry C, Khan RH, Tremblay DM, Moineau S, Mulvey MR, Doualla-Bell F, Fournier E, Nadon C, Goodridge L, Bekal S. 2020. Source Tracking Based on Core Genome SNV and CRISPR Typing of Salmonella enterica Serovar Heidelberg Isolates Involved in Foodborne Outbreaks in Quebec, 2012. Front Microbiol 11:1317. Résumé
  61. Teusink B, Kuipers OP, Moineau S. 2020. Symposium on Lactic Acid Bacteria-reading while waiting for a meeting. FEMS Microbiol Rev Résumé
  62. Jolicoeur AP, Shao Y, Lemay M-L, Moineau S. 2020. CRISPR-Cas Systems in Starter Cultures, Reference Module in Food Science Résumé
  63. Das PS, Gagnon-Turcotte G, Ouazaa K, Bouzid K, Hosseini SN, Bharucha E, Tremblay D, Moineau S, Messaddeq Y, Corbeil J, Gosselin B. 2020. The EcoChip 2: An Autonomous Sensor Platform for Multimodal Bio-environmental Monitoring of the Northern Habitat. Annu Int Conf IEEE Eng Med Biol Soc 2020:4101-4104. Résumé
  64. Kot W, Olsen NS, Nielsen TK, Hutinet G, de Crécy-Lagard V, Cui L, Dedon PC, Carstens AB, Moineau S, Swairjo MA, Hansen LH. 2020. Detection of preQ0 deazaguanine modifications in bacteriophage CAjan DNA using Nanopore sequencing reveals same hypermodification at two distinct DNA motifs. Nucleic Acids Res 48:10383-10396. Résumé
  65. Spinelli S, Tremblay D, Moineau S, Cambillau C, Goulet A. 2020. Structural Insights into Lactococcal Siphophage p2 Baseplate Activation Mechanism. Viruses 12. Résumé
  66. Lemay ML, Maaß S, Otto A, Hamel J, Plante PL, Rousseau GM, Tremblay DM, Shi R, Corbeil J, Gagné SM, Becher D, Moineau S. 2020. A Lactococcal Phage Protein Promotes Viral Propagation and Alters the Host Proteomic Response During Infection. Viruses 12. Résumé
  67. Yousfi K, Usongo V, Berry C, Khan RH, Tremblay DM, Moineau S, Mulvey MR, Doualla-Bell F, Fournier E, Nadon C, Goodridge L, Bekal S. 2020. Source Tracking Based on Core Genome SNV and CRISPR Typing of Salmonella enterica Serovar Heidelberg Isolates Involved in Foodborne Outbreaks in Québec, 2012. Front Microbiol 11:1317. Résumé
  68. Mosterd C, Moineau S. 2020. Characterization of a Type II-A CRISPR-Cas System in Streptococcus mutans. mSphere 5. Résumé
  69. Mosterd C, Rousseau GM, Moineau S. 2020. A short overview of the CRISPR-Cas adaptation stage. Can J Microbiol doi:10.1139/cjm-2020-0212:1-12. Résumé
  70. de Melo AG, Rousseau GM, Tremblay DM, Labrie SJ, Moineau S. 2020. DNA tandem repeats contribute to the genetic diversity of Brevibacterium aurantiacum phages. Environ Microbiol 22:3413-3428. Résumé
  71. Gao R, Naushad S, Moineau S, Levesque R, Goodridge L, Ogunremi D. 2020. Comparative genomic analysis of 142 bacteriophages infecting Salmonella enterica subsp. enterica. BMC Genomics 21:374. Résumé
  72. Philippe C, Levesque S, Dion MB, Tremblay DM, Horvath P, Lüth N, Cambillau C, Franz C, Neve H, Fremaux C, Heller KJ, Moineau S. 2020. Novel Genus of Phages Infecting Streptococcus thermophilus: Genomic and Morphological Characterization. Appl Environ Microbiol 86. Résumé
  73. Cornuault, J.K. et S. Moineau. 2020. A Jumbo Formation in the Viral Game Plan. Crispr J. 3:14-17. Résumé
  74. Dion, M.B., F. Oechslin et S. Moineau. 2020. Phage diversity, genomics and phylogeny. Nat Rev Microbiol. Résumé
  75. Mathieu, A., M. Dion, L. Deng, D. Tremblay, E. Moncaut, S.A. Shah, J. Stokholm, K.A. Krogfelt, S. Schjorring, H. Bisgaard, D.S. Nielsen, S. Moineau et M.A. Petit. 2020. Virulent coliphages in 1-year-old children fecal samples are fewer, but more infectious than temperate coliphages. Nat. Commun. 11:378. Résumé
  76. Agudelo, D., S. Carter, M. Velimirovic, A. Duringer, J.F. Rivest, S. Levesque, J. Loehr, M. Mouchiroud, D. Cyr, P.J. Waters, M. Laplante, S. Moineau, A. Goulet, et Y. Doyon. 2020. Versatile and robust genome editing with Streptococcus thermophilus CRISPR1-Cas9. Genome Res. Résumé
  77. Makarova, K.S., Y.I. Wolf, J. Iranzo, S.A. Shmakov, O.S. Alkhnbashi, S.J.J. Brouns, E. Charpentier, D. Cheng, D.H. Haft, P. Horvath, S. Moineau, F.J.M. Mojica, D. Scott, S.A. Shah, V. Siksnys, M.P. Terns, C. Venclovas, M.F. White, A.F. Yakunin, W. Yan, F. Zhang, R.A. Garrett, R. Backofen, J. van der Oost, R. Barrangou, et E.V. Koonin. 2019. Evolutionary classification of CRISPR-Cas systems: a burst of class 2 and derived variants. Nat Rev Microbiol. Résumé
  78. Hutinet, G., W. Kot, L. Cui, R. Hillebrand, S. Balamkundu, S. Gnanakalai, R. Neelakandan, A.B. Carstens, C. Fa Lui, D. Tremblay, D. Jacobs-Sera, M. Sassanfar, Y.J. Lee, P. Weigele, S. Moineau, G.F. Hatfull, P.C. Dedon, L.H. Hansen, et V. de Crecy-Lagard. 2019. 7-Deazaguanine modifications protect phage DNA from host restriction systems. Nat. Commun. 10:5442. Résumé
  79. Fuchsbauer, O., P. Swuec, C. Zimberger, B. Amigues, S. Levesque, D. Agudelo, A. Duringer, A. Chaves-Sanjuan, S. Spinelli, G.M. Rousseau, M. Velimirovic, M. Bolognesi, A. Roussel, C. Cambillau, S. Moineau, Y. Doyon et A. Goulet. 2019. Cas9 Allosteric Inhibition by the Anti-CRISPR Protein AcrIIA6. Mol. Cell. Résumé
  80. Labrie, S.J., C. Mosterd, S. Loignon, M.E. Dupuis, P. Desjardins, G.M. Rousseau, D.M. Tremblay, D.A. Romero, P. Horvath, C. Fremaux et S. Moineau. 2019. A mutation in the methionine aminopeptidase gene provides phage resistance in Streptococcus thermophilus. Sci Rep 9:13816. Résumé
  81. Fong, K., D.M. Tremblay, P. Delaquis, L. Goodridge, R.C. Levesque, S. Moineau, C.A. Suttle et S. Wang. 2019. Diversity and Host Specificity Revealed by Biological Characterization and Whole Genome Sequencing of Bacteriophages Infecting Salmonella enterica. Viruses 11. Résumé
  82. Deng, L., R. Silins, J.L. Castro-Mejia, W. Kot, L. Jessen, J. Thorsen, S. Shah, J. Stokholm, H. Bisgaard, S. Moineau et D.S. Nielsen. 2019. A Protocol for Extraction of Infective Viromes Suitable for Metagenomics Sequencing from Low Volume Fecal Samples. Viruses 11. Résumé
  83. Levesque, S., A.G. de Melo, S.J. Labrie et S. Moineau. 2019. Mobilome of Brevibacterium aurantiacum Sheds Light on Its Genetic Diversity and Its Adaptation to Smear-Ripened Cheeses. Front Microbiol 10:1270. Résumé
  84. Paquet, V.E., A.T. Vincent, S. Moineau, S.J. Charette. 2019. Beyond the A-layer: adsorption of lipopolysaccharides and characterization of bacteriophage-insensitive mutants of Aeromonas salmonicida subsp. salmonicida. Mol. Microbiol. Résumé
  85. Bondy-Denomy, J., A.R. Davidson, J.A. Doudna, P.C. Fineran, K.L. Maxwell, S. Moineau, X. Peng, E.J. Sontheimer et B. Wiedenheft. 2018. A unified resource for tracking anti-CRISPR names. The CRISPR Journal. 1:304-305. Résumé
  86. Davies, K. et S. Moineau. 2018. The phage whisperer: An interview with Sylvain Moineau. The CRISPR Journal. 1:363-366. Résumé
  87. Vincent, A.T., V.E. Paquet, S. Moineau et S.J. Charrette. 2019. Would bacteriophages be a new old complement to antibiotics in aquaculture? In Microbial Communities in Aquaculture Ecosystems (N. Derome, Editor). Springer. Sous presse
  88. Lemay, M.-L. et S. Moineau. 2019. How are genomes modified ? – Cross breeding, mutagenesis and CRISPR-Cas9. In: Genetically modified and irradiated food: Controversial issues – facts versus perceptions. Ed. V. Andersen. Elsevier. Sous presse
  89. Lemay, M.-L., A. Otto, S. Maaß, K. Plate, D. Becher et S. Moineau. 2019. Investigating Lactococcus lactis MG1363 response to phage p2 infection at the proteome level. Molecular & Cellular Proteomics. Sous presse
  90. Ngazoa-Kakou, S., Y. Shao, G. Rousseau, A.A. Addablah, D.M. Tremblay, G. Hutinet, N. Lemire, P.-L. Plante, J. Corbeil, A. Koudou, B.K. Soro, D.N. Coulibaly, S. Aoussi, M. Dosso et S. Moineau. 2019. Complete genome of Escherichia coli siphophage BRET. Microbiology Resource Announcements. Sous presse
  91. Chabas, H., A. Nicot, S. Meaden, E. Westra, D. Tremblay, L. Pradier, S. Lion, S. Moineau et S. Gandon. 2019. Variability in the durability of CRISPR-Cas immunity. Philos. Trans. R. Soc. Lond. B Biol. Sci. Sous presse
  92. Liu, H., H. Geagea, G.M. Rousseau, S.J. Labrie, D.M. Tremblay, X. Liu et S. Moineau. 2018. Characterization of the Escherichia coli virulent Myophage ST32. Viruses 10:616. Sous presse
  93. Dion, M.B., S.J. Labrie, S.A. Shah et S. Moineau. 2018. CRISPRStudio: A user-friendly software for rapid CRISPR array visualization. Viruses 10:602. Sous presse
  94. Sylvain, M., F. Lehoux, S. Morency, F. Faucher, E. Bharucha, D.M. Tremblay, F. Raymond, D. Sarrazin, M. Allard, S. Moineau, J. Corbeil, Y. Messaddeq et B. Gosselin. 2018. The EcoChip: a wireless multi-sensor platform for comprehensive environmental monitoring. IEEE Trans Biomed Circuits Syst. doi:10.1109/TBCAS.2018.2878404. Sous presse
  95. da Silva Xavier, A., J.C.F. de Almeida, A.G. de Melo, G.M. Rousseau, D.M. Tremblay, R.R. de Rezende, S. Moineau et P. Alfenas-Zerbini. 2018. Characterization of CRISPR-Cas systems in the Ralstonia solanacearum species complex. Molecular plant pathology. doi:10.1111/mpp.12750. Sous presse
  96. Chabas, H., S. Lion, A. Nicot, S. Meaden, S. van Houte, S. Moineau, L.M. Wahl, E.R. Westra et S. Gandon. 2018. Evolutionary emergence of infectious diseases in heterogeneous host populations. PloS Biology. Sous presse
  97. Croteau F.R., G.M. Rousseau et S. Moineau. 2018. Le système CRISPR-Cas : Au-delà de l’édition génomique. Médecine/Sciences. Sous presse
  98. Millen, A.M., J.E. Samson, D. Tremblay, A.H. Magadán, G.M. Rousseau, S. Moineau et D.A. Romero. 2018. Lactococcus lactis type III-A CRISPR-Cas system cleaves bacteriophage RNA. RNA Biology. Sous presse
  99. Hynes, A.P., G.M. Rousseau, D. Agudelo, A. Goulet, B. Amigues, J. Loehr, D.A. Romero, C. Fremaux, P. Horvath, Y. Doyon, C. Cambillau et S. Moineau. 2018. Widespread anti-CRISPR proteins in virulent bacteriophages inhibit a range of Cas9 proteins. Nature Communications. 9:2919. Résumé
  100. El Haddad, L., M.-J. Lemay, G.E. Khalil, S. Moineau et C.P. Champagne. 2018. Microencapsulation of a Staphylococcus phage for concentration and long-term storage. Food Microbiology. 76:304-309. Résumé
  101. Ngazoa-Kakou S, C. Philippe, D.M. Tremblay, S. Loignon,A. Koudou, A. Abole, D. Ngolo Coulibaly, S. Kan Kouassi,M. Kouamé Sina, S. Aoussi, M. Dosso et S. Moineau. 2018. Complete genome sequence of Ebrios, a novel T7virus isolated from the Ebrie Lagoon in Abidjan, Côte d’Ivoire. Genome Announc. 6:e00280-18. Résumé
  102. Roy, B., C. Philippe, M.J. Loessner, J. Goulet et S. Moineau. 2018. Production of Bacteriophages by Listeria Cells Entrapped in Organic Polymers. Viruses 10. Résumé
  103. Qimron, U., D. Sashital, S. Moineau, A. Marchfelder, Y. Zhang et P. Fineran. 2018. Voices: CRISPR Inspirations. Cell 173:1560-1561. Résumé
  104. Fraud, S. et S. Moineau. 2018. Phages. Le fromage. 4ième édition. J.-C. Gillis and A. Ayerbe (eds). Lavoisier. p. 293-302. Résumé
  105. Lévesque, S. et S. Moineau. 2018. A stockpile of antiviral defences. Nature. 556:318-319. Résumé
  106. Mottawea, W., M.-O. Duceppe, A.A. Dupras, V. Usongo, J. Jeukens, L. Freschi, J.-G. Emond-Rheault, J. Hamel, I. Kukavica-Ibrulj, B. Boyle, A. Gill, E. Burnett, E. Franz, G. Arya, J.T. Weadge, S. Gruenheid, M. Wiedmann, H. Huang, F. Daigle, S. Moineau, S. Bekal, R.C. Levesque, L. Goodridge et D. Ogunremi. 2018. Salmonella enterica prophage sequence profiles reflect genome diversity and can be used for high discrimination subtyping. Front. Microbiol. Sous presse
  107. Vincent, C., V. Usongo, C. Berry, D.M. Tremblay, S. Moineau, K. Yousfi, F. Doualla-Bell, E. Fournier, C. Nadon, L. Goodridge et S. Bekal. 2018. Comparison of advanced whole genome sequence-based methods to distinguish strains of Salmonella enterica serovar Heidelberg involved in foodborne outbreaks in Québec. Food Microbiol. 73:99-110. Résumé
  108. Lemay, M.-L., A.C. Renaud, G.M. Rousseau et S. Moineau. 2018. Targeted genome editing of virulent phages using CRISPR-Cas9. Bio-Protocol. 8: e2674. Résumé
  109. Geagea, H., S.J. Labrie, M. Subirade et S. Moineau. 2018. The tape measure protein is involved in the heat stability of Lactococcus lactis phages. Appl. Environ. Microbiol. 84:e02082-17. Résumé
  110. Weissman, J.L., R. Holmes, R. Barrangou, S. Moineau, W.F. Fagan, B. Levin et P.LF. Johnson. 2018. Immune loss as a driver of coexistence during host-phage coevolution. ISME J. 12:585-597. Résumé
  111. de Melo, A.G., S. Levesque et S. Moineau. 2018. Phages as friends and enemies in food processing. Curr. Opin. Biotechnol. 49:185-190. Résumé
  112. Vincent, A.T., F.D. Rouleau, S. Moineau et S.J. Charrette. 2017. Study of mesophilic Aeromonas salmonicida A527 strain sheds light on the species lifestyles and taxonomic dilemma. FEMS Microbiol. Lett. 364:fnx239. Résumé
  113. Hynes, A.P., G.M. Rousseau, M.L. Lemay, P. Horvath, D.A. Romero, C. Fremaux et S. Moineau. 2017. An anti-CRISPR from a virulent streptococcal phage inhibits Streptococcus pyogenes Cas9. Nat. Microbiol. doi: 10.1038/s41564-017-0004-7. Résumé
  114. Vincent, A.T., V.E. Paquet, A. Bernatchez, D.M. Tremblay, S. Moineau et S.J. Charette. 2017. Characterization and diversity of phages infecting Aeromonas salmonicida subsp. salmonicida. Sci. Rep. 7:7054. Résumé
  115. Kot, W., M. Sabri, H. Gingras, M. Ouellette, D.M. Tremblay et S. Moineau. 2017. Complete Genome Sequence of Streptococcus pneumoniae Virulent Phage MS1. Genome Announc. 5:e00333-17. Résumé
  116. Emond-Rheault et al. 2017. A Syst-OMICS Approach to Ensuring Food Safety and Reducing the Economic Burden of Salmonellosis. Front. Microbiol. 8:996. Résumé
  117. Lemay, M.L., P. Horvath et S. Moineau. 2017. The CRISPR-Cas app goes viral. Curr. Opin. Microbiol. 37:103-109. Résumé
  118. Eraclio, G., M. G. Fortina, S. J. Labrie, D. M. Tremblay et S. Moineau. 2017. Characterization of prophages of Lactococcus garvieae. Sci. Rep. 7:1856. Article
  119. Lemay, M.L., D.M. Tremblay et S. Moineau. 2017. Genome engineering of virulent lactococcal phages using CRISPR-Cas9. ACS Synth. Biol. Résumé
  120. Hynes, A.P. et S. Moineau. 2017. Phagebook: The Social Network. Mol. Cell 65:963-964. Résumé
  121. Achigar, R., A.H. Magadan, D.M. Tremblay, M. Julia Pianzzola et S. Moineau. 2017. Phage-host interactions in Streptococcus thermophilus: Genome analysis of phages isolated in Uruguay and ectopic spacer acquisition in CRISPR array. Sci. Rep. 7:43438. Résumé
  122. Geagea, H., A. Gomaa, G. Remondetto, S. Moineau et M. Subirade. 2017. Molecular structure of lactoferrin influences the thermal resistance of lactococcal phages. J. Agric. Food Chem. 65:2214-2221. Résumé
  123. Trudel, L., M. Frenette, S. Moineau. 2017. CRISPR–Cas in the laboratory classroom. Nat. Microbiol. 2:17018. Résumé
  124. Hynes, A.P., M.-L. Lemay, L. Trudel, H. Deveau, M. Frenette, D.M. Tremblay et S. Moineau. 2017. Detecting natural adaptation of the Streptococcus thermophilus CRISPR-Cas systems in research and classroom settings. Nat. Protoc. 12:547-565. Résumé
  125. Moineau, S. et D.M. Tremblay. 2017. Bacteriophage. Reference Module in Life Sciences. Pages 1-5. doi:10.1016/B978-0-12-809633-8.06122-7. Résumé
  126. Hamdi, S., G.M. Rousseau, S.J. Labrie, D.M. Tremblay, R. Saïed Kourda, K. Ben Slama et S. Moineau. 2017. Characterization of two polyvalent phages infecting Enterobacteriaceae. Sci. Rep. 7:40349. Résumé
  127. Champagne, C.P., S. Moineau, S. Lafleur et T. Savard. 2017. The effect of bacteriophages on the acidification of a vegetable juice medium by microencapsulated Lactobacillus plantarum. Food Microbiol. 63:28-34. Résumé
  128. Turgeon, N., K. Michel, T.-L. Ha, E. Robine, S. Moineau et C. Duchaine. 2016. Resistance of aerosolized bacterial viruses to four germicidal products. PloS one 11:e0168815 Résumé
  129. Labrie, S.J. et S. Moineau. 2016. Phosphorylation, an altruistic bacterial trick to halt phages. Cell Host Microbe 20:409-410. Résumé
  130. Melo, A. G., S. Labrie, J. Dumaresq, R. Roberts, D. Tremblay et S. Moineau. 2016. Complete genome sequence of Brevibacterium linens SMQ-1335. Genome Announc. 4:e01242-16. Résumé
  131. Hamdi, S., G. Rousseau, S.L. Labrie, R. Saïed Kourda, D. Tremblay, S. Moineau et K. Ben Slama. 2016. Characterization of five Podoviridae phages infecting Citrobacter freundii. Front. Microbiol. 7:1023. Résumé
  132. Hynes, A.P., M.L. Lemay et S. Moineau. 2016. Applications of CRISPR-Cas in its natural habitat. Curr. Opin. Chem. Biol. 34:30-36. Résumé
  133. Hynes, A.P., S.J. Labrie et S. Moineau. 2016. Programming Native CRISPR Arrays for the Generation of Targeted Immunity. mBio 7:e00202-16. Résumé
  134. Tremblay-Bouliane, K., C. Olsen, D. Tremblay, S. Moineau, B. Gaillet et A. Garnier. 2016. Screening peptide-ore interactions with a phage display library for bio-flotation application. CIM Journal. 7:178-184. Résumé
  135. Lugli, G.A., C. Milani, F. Turroni, D. Tremblay, C. Ferrario, L. Mancabelli, S. Duranti, D.V. Ward, M.C. Ossiprandi, S. Moineau, D. van Sinderen et M. Ventura. 2015. Prophages of the genus Bifidobacterium as modulating agents of the infant gut microbiota. Environ. Microbiol. 18:2196-2213. Résumé
  136. Mercanti, D.J., G.M. Rousseau, M.L. Capra, A. Quiberoni, D.M. Tremblay, S.J. Labrie et S. Moineau. 2016. Genomic Diversity of Phages Infecting Probiotic Strains of Lactobacillus paracasei. Appl. Environ. Microbiol. 82:95-105. Résumé
  137. El Haddad, L., J.P. Roy, G.E. Khalil, D. St-Gelais, C.P. Champagne, S. Labrie et S. Moineau. 2016. Efficacy of two Staphylococcus aureus phage cocktails in cheese production. Int. J Food Microbiol. 217:7-13. Résumé
  138. Leprohon, P., H. Gingras, S. Ouennane, S. Moineau, M. Ouellette. 2015. A genomic approach to understand interactions between Streptococcus pneumoniae and its bacteriophages. BMC genomics 16:972. Résumé
  139. Makarova, K.S., Y.I. Wolf, O.S. Alkhnbashi, F. Costa, S.A. Shah, S.J. Saunders, R. Barrangou, S.J. Brouns, E. Charpentier, D.H. Haft, P. Horvath, S. Moineau, F.J. Mojica, R.M. Terns, M.P. Terns, M.F. White, A.F. Yakunin, R.A. Garrett, J. van der Oost, R. Backofen et E.V. Koonin. 2015. An updated evolutionary classification of CRISPR-Cas systems. Nat. Rev. Microbiol. 13:722-736. Résumé
  140. Eraclio, G., D.M. Tremblay, A. Lacelle-Cote, S.J. Labrie, M.G. Fortina et S. Moineau. 2015. A new virulent phage infecting Lactococcus garvieae, with homology to Lactococcus lactis phages. Appl. Environ. Microbiol. 81:8358-8365. Résumé
  141. Verreault, D., M. Marcoux-Voiselle, N. Turgeon, S. Moineau et C. Duchaine. 2015. Resistance of Aerosolized Bacterial Viruses to Relative Humidity and Temperature. Appl. Environ. Microbiol. 81:7305-7311. Résumé
  142. Vale, P.F., G. Lafforgue, F. Gatchitch, R. Gardan, S. Moineau et S. Gandon. 2015. Costs of CRISPR-Cas-mediated resistance in Streptococcus thermophilus. Proceedings of the Royal Society B-Biological Sciences. 282:20151270. Résumé
  143. Geagea, H., A.I. Gomaa, G. Remondetto, S. Moineau et M. Subirade. 2015. Investigation of the protective effect of whey proteins on lactococcal phages during heat treatment at various pH. Int. J. Food Microbiol. 210:33-41. Résumé
  144. Dupuis M.-È., R. Barrangou et S. Moineau. 2015. Procedures for generating CRISPR mutants with novel spacers acquired from viruses or plasmids. Methods Mol. Biol. 1311:195-222. Résumé
  145. Labrie, S.J., D.M. Tremblay, P.-L Plante, J. Wasserscheid, K. Dewar, J. Corbeil et S. Moineau. 2015. Complete genome sequence of Streptococcus thermophilus SMQ-301, a model strain for phage-host interactions. Genome Announc. 3. Résumé.
  146. Bélanger, M. et S. Moineau. 2015. Mutational analysis of the antitoxin in the lactococcal type III toxin-antitoxin system AbiQ. Appl. Environ. Microbiol. 81:3848-3855. Résumé
  147. McCabe, O., S. Spinelli, C, Farenc, M. Labbé, D. Tremblay, S. Blangy, S. Oscarson, S.Moineau et C. Cambillau. 2015. The targeted recognition of Lactococcus lactis phages to their polysaccharide receptors. Mol. Microbiol. 96:875-886. Résumé
  148. Pujato, S., D. Mercanti, D. Guglielmotti, G. Rousseau, S. Moineau, J. Reinheimer et A. Quiberoni. 2015. Phages of dairy Leuconostoc mesenteroides: genomics and factors influencing their adsorption. Int. J. Food Microbiol. 201:58-65. Résumé
  149. Mahony, J., D. Tremblay, S.J. Labrie, S. Moineau et D. van Sinderen. 2015. Investigating the requirement for calcium during lactococcal phage infection. Int. J. Food Microbiol. 201:47-51. Résumé
  150. Ouennane, S., P. Leprohon et S. Moineau. 2015. Diverse virulent pneumophages infect Streptococcus mitis. PLoS ONE 10:e0118807. Résumé
  151. Anany, H., A.I. Moreno Switt, N. De Lappe, H.-W. Ackermann, D.M. Reynolds, A.M. Kropinski, M. Wiedmann, M.W. Griffiths, D. Tremblay, S. Moineau, J.H.E. Nash et D. Turner. 2015. A new bacteriophage subfamily - Jerseyvirinae. Arch. Virol. 160:1021-1033 Résumé
  152. Giguère, S., F. Laviolette, M. Marchand, D. Tremblay, S. Moineau, E. Biron, X. Liang et J. Corbeil. 2015. Machine learning assisted design of highly active peptides for drug discovery. PLoS Comput. Biol. 11:e1004074. Résumé
  153. Samson, J.E., A.H. Magadan, S. Moineau. 2015. The CRISPR-Cas Immune System and Genetic Transfers: Reaching an Equilibrium. Microbiology Spectrum 3(1): doi:10.1128/microbiolspec.PLAS-0034-2014. Résumé
  154. Labrie, S.J., M.E. Dupuis, D.M. Tremblay, P.L. Plante, J. Corbeil et S. Moineau. 2014. A new Microviridae phage isolated from a failed biotechnological process driven by Escherichia coli. Appl. Environ. Microbiol. Résumé
  155. Aswani, V.H., D.M. Tremblay, S. Moineau et S.K. Shukla. 2014. Complete Genome Sequence of a Staphylococcus epidermidis Bacteriophage Isolated from the Anterior Nares of Humans. Genome Announc. 2. Résumé
  156. Martel, B. et S. Moineau. 2014. CRISPR-Cas: an efficient tool for genome engineering of virulent bacteriophages. Nucleic Acids Res. 42:9504-9513. Résumé
  157. El Haddad, L., N. Ben Abdallah, P.L. Plante, J. Dumaresq, R. Katsarava, S. Labrie, J. Corbeil, D. St-Gelais et S. Moineau. 2014. Improving the safety of Staphylococcus aureus polyvalent phages by their production on a Staphylococcus xylosus strain. PLoS ONE 9:e102600. Résumé
  158. Hynes, A.P., M. Villion et S. Moineau. 2014. Adaptation in bacterial CRISPR-Cas immunity can be driven by defective phages. Nat. Commun. 5:4399. Résumé
  159. Labrie, S.J., L. El Haddad, D.M. Tremblay, P.L. Plante, J. Wasserscheid, J. Dumaresq, K. Dewar, J. Corbeil et S. Moineau. 2014. First complete genome sequence of Staphylococcus xylosus, a meat starter culture and a host to propagate Staphylococcus aureus phages. Genome Announc. 2. Résumé
  160. Spinelli, S., C. Bebeacua, I. Orlov, D. Tremblay, B.P. Klaholz, S. Moineau et C. Cambillau. 2014. CryoEM structure of the lactococcal siphophage 1358 virion. J. Virol. 88:8900-8910. Résumé
  161. Hynes, A.P. et S. Moineau. 2014. CRISPR-Cas Systems: Making the cut. Microbe. 9:204-210. Article
  162. Carte, J., R.T. Christopher, J.T. Smith, S. Olson, R. Barrangou, S. Moineau, C.V. Glover, 3rd, B.R. Graveley, R.M. Terns et M.P. Terns. 2014. The three major types of CRISPR-Cas systems function independently in CRISPR RNA biogenesis in Streptococcus thermophilus. Mol. Microbiol. 93:98-112. Résumé
  163. Turgeon, N., M.J. Toulouse, B. Martel, S. Moineau et C. Duchaine. 2014. Comparison of five bacteriophages as models for viral aerosols studies. Appl. Environ. Microbiol. 80:4242-4250. Résumé
  164. Farenc, C., S. Spinelli, E. Vinogradov, D. Tremblay, S. Blangy, I. Sadovskaya, S. Moineau et C. Cambillau. 2014. Molecular insights on the recognition of a Lactococcus lactis cell wall pellicle by phage 1358 receptor binding protein. J. Virol. 88:7005-7015. Résumé
  165. Campagna, C., M. Villion, S.J. Labrie, C. Duchaine et S. Moineau. 2014. Inactivation of dairy bacteriophages by commercial sanitizers and disinfectants. Int. J. Food Microbiol. 171:41-47. Résumé
  166. Bebeacua, C., D. Tremblay, C. Farenc, M.P. Chapot-Chartier, I. Sadovskaya, M. van Heel, D. Veesler, S. Moineau et C. Cambillau. 2013. Structure, adsorption to host, and infection mechanism of virulent lactococcal phage p2. J. Virol. 87:12302-12312. Résumé
  167. Samson, J.E., A.H. Magadan, M. Sabri et S. Moineau. 2013. Revenge of the phages: defeating bacterial defences. Nat Rev Microbiol 11:675-687. Résumé
  168. Samson, J.E., M. Belanger et S. Moineau. 2013. Effect of the abortive infection mechanism and type III toxin/antitoxin system AbiQ on the lytic cycle of Lactococcus lactis phages. J. Bacteriol. 195:3947-3956. Résumé
  169. Dupuis, M.-È., M. Villion, A.H. Magadán et S. Moineau. 2013. CRISPR- Cas and R-M systems are compatible and increase phage resistance. Nature Comm. 4:2087. Résumé
  170. Mahony, J., B. Martel, D. Tremblay, H. Neve, K. Heller, S. Moineau et D. van Sinderen. 2013. Molecular analysis of lactococcal phages Q33 and BM13: Identification of a new P335 subgroup. Appl. Environ. Microbiol. 79:4401-9. Résumé
  171. Villion, M. et S. Moineau. 2013. Phages hijack a host’s defence. Nature. 494:433-434. Résumé
  172. Levin, B.R., S. Moineau, M. Bushman et R. Barrangou. 2013. The population and evolutionary dynamics of phage and bacteria with CRISPR- mediated immunity. PLOS Genetics. 9:e1003312. Résumé
  173. Scaltriti, E., E. Polverini, S. Grolli, E. Eufemi, S. Moineau, C. Cambillau et R. Ramoni. 2013. DNA binding mechanism of a SSB protein from Lactococcus lactis siphophage p2. BBA - Proteins and Proteomics. 1834: 1070-1076. Résumé
  174. El Haddad, L. et S. Moineau. 2013. Characterization of a novel Panton-Valentine leukocidin-encoding staphylococcal phage and its natural PVL-lacking variant. Appl. Environ. Microbiol. 79:2828-2832.  Résumé
  175. Samson, J.E. et S. Moineau. 2013. Bacteriophages in food fermentations: New frontiers in a continuous arms race. Annu. Rev. Food Sci. Technol. 4:347-368. Résumé.
  176. Samson, J.E., S. Spinelli, C. Cambillau et S. Moineau. 2013.Structure and activity of AbiQ, a lactococcal endoribonuclease belonging to the type-III toxin-antitoxin system. Mol. Microbiol. 87:756-68. Résumé
  177. Dupuis M.-E. et S. Moineau. 2013. Type II CRISPR-Cas systems. In CRISPR-Cas Systems: RNA-mediated Adaptive Immunity in Bacteria and Archaea. Barrangou, Rodolphe, van der Oost, John, (Eds.) Springer. p.171-200. Résumé
  178. Moineau, S. 2013. Bacteriophages. Brenner’s Online Encyclopedia of Genetics, 2nd edition. Maloy, S. and Hughes, K. (Eds.) Elsevier. p.280-283. Résumé
  179. Villion, M. et S. Moineau. 2013. The double-edged sword of CRISPR- Cas systems. Cell Res. 23:15-17. Résumé
  180. Cornelissen, A., R. Lavigne et S. Moineau. 2012. Fighting bacteriophage infection: mechanisms of bacterial resistance. Phage Therapy: Current Research and Applications. Borysowski, Międzybrodzki, and Górski (eds). Caister Academic Press.
  181. Briggiler Marcó, M., J.E. Garneau, D.M. Tremblay, A. Quiberoni et S. Moineau. 2012. Characterization of two virulent phages of Lactobacillus plantarum. Appl. Environ. Microbiol. 78:8719-8734. Résumé
  182. Briggiler Marcó, M., S. Moineau et A. Quiberoni. 2012. Bacteriophages and dairy fermentations. Bacteriophages. 2(3). Résumé
  183. Labrie, S.J., D.M. Tremblay, M. Moisan, M. Villion, A.H. Magadán, V. Campanacci, C. Cambillau et S. Moineau. 2012. The major capsid protein and two early-expressed phage genes are involved in the activity of the lactococcal abortive infection mechanism AbiT. Appl. Environ. Microbiol. 78:6890-6899. Résumé
  184. Magadán, A.H., M.-È. Dupuis, M. Villion et S. Moineau. 2012.Cleavage of phage DNA by the Streptococcus thermophilus CRISPR3-Cas System. PLoS ONE. 7:e40913. Résumé
  185. Comeau, A., D. Tremblay, S. Moineau, A. Kushkina, F.I. Tovkach, T. Rattei, H.M. Krisch et H.-W. Ackermann. 2012. Phage morphology recapitulates phylogeny: The comparative genomics of a new group of dwarf myoviruses. PLoS ONE. 7:e40102.Résumé
  186. Moisan, M. et S. Moineau. 2012. Multilocus Sequence Typing Scheme for the Characterization of 936-like Phages Infecting Lactococcus lactis. Appl. Environ. Microbiol. 78:4646-4653. Résumé
  187. Delisle, A. L., M. Guo, N. I. Chalmers, G. J. Barcak, G. M. Rousseau et S. Moineau. 2012. Biology and Genome Sequence of Streptococcus mutans Phage M102AD. Appl. Environ. Microbiol. 78:2264-71. Résumé
  188. McCusky Gendron, L., L. Trudel, S. Moineau et C. Duchaine. 2012. Evaluation of bacterial contaminants found on unused paper towels and possible postcontamination after handwashing: A pilot study. American Journal of Infection Control 40:e5-e9. Résumé
  189. Rousseau, G.M., H. Deveau et S. Moineau. 2012. Phage Resistance in Lactic Acid Bacteria. In: Bacteriophages in Dairy Processing. A. Quiberoni and J. Reinheimer. (eds) Nova Science Publishers, Inc. p. 149-174. Résumé
  190. Aswani, V., D. M. Tremblay, S. Moineau et S. K. Shukla. 2011. A first report of Staphylococcus epidermidis bacteriophages from the anterior nares of Humans. Appl. Environ. Microbiol. 77:7853-7855. Résumé
  191. Garneau, J. et S. Moineau. 2011. Bacteriophages of lactic acid bacteria and their impact on milk fermentations. Microbial Cell Factories. 10(Suppl 1):S20. Résumé
  192. Wang, C., M. Villion, C. Semper, C. Coros, S. Moineau et S. Zimmerly. 2011. A reverse transcriptase-related protein mediates phage resistance and polymerizes untemplated DNA in vitro. Nucleic Acids Research. 39: 7620-7629. Résumé
  193. Häuser, R., M. Sabri, S. Moineau et P. Uetz. 2011. The proteome and interactome of the Streptococcus phage Cp-1 virion. J. Bacteriol. 193:3135-3138. Résumé
  194. Makarova, K.S., D.H. Haft, R. Barrangou, S.J.J. Brouns, E. Charpentier, P. Horvath, S. Moineau, F.J. M. Mojica, Y.I. Wolf, A.F. Yakunin, J. van der Oost et E.V. Koonin. 2011. Evolution and classification of the CRISPR/Cas systems. Nature Reviews Microbiology. 9:467-477. Résumé
  195. Scaltriti, E., H. Launay, M.-M. Genois, P. Bron, C. Rivetti, S. Grolli, M. Ploquin, Valérie Campanacci, M. Tegoni, C. Cambillau, S. Moineau et J.-Y. Masson. 2011. Lactococcal phage p2 ORF35-Sak3 is an ATPase involved in DNA recombination and AbiK mechanism. Mol. Microbiol. 80:102-116. Résumé
  196. Sabri, M., R. Häuser, M. Ouellette, J. Liu, M. Dehbi, G. Moeck, E. García, B. Titz, P. Uetz et S. Moineau. 2011. Genome annotation and intraviral interactome of the Streptococcus pneumoniae virulent phage Dp-1. J. Bacteriol. 193:551-562. Résumé
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  203. Labrie S.J., J.E. Samson et S. Moineau. 2010. Bacteriophage resistance mechanisms. Nature Reviews Microbiology. 8:317-327. Résumé
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  208. Dupuis, M.-E. et S. Moineau. 2010. Genome organization and characterization of the virulent lactococcal phage 1358 and its similarities with Listeria phages. Appl. Environ. Microbiol. 76:1623-1632. Résumé
  209. Haaber, J., J.E. Samson, S.J. Labrie, V. Campanacci, C. Cambillau, S. Moineau, et K. Hammer. 2010. Lactococcal abortive infection protein AbiV interacts directly with the phage protein SaV and prevents translation of phage proteins. Appl. Environ. Microbiol. 76:7085-7092. Résumé
  210. Verreault, D., G. M. Rousseau, L. Gendron, D. Massé, S. Moineau et C. Duchaine. 2010. Comparison of polycarbonate and polytetrafluoroethylene filters for sampling of airborne phages. Aerosol Sci. Technol. 44:203-207. Résumé
  211. Gendron, L., D. Verreault, M. Veillette, S. Moineau et C. Duchaine. 2010. Evaluation of filters for the sampling and quantification of RNA phage aerosols. Aerosol Sci. Technol. 44:893-901. Résumé
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  213. Veesler, D., B. Dreier, S. Blangy, J. Lichière, D. Tremblay, S. Moineau, S. Spinelli, M. Tegoni, A. Plückthun, V. Campanacci et C. Cambillau. 2009. Crystal structure and function of a DARPin neutralizing inhibitor of lactococcal phage TP901-1: Comparison of DARPin and camelid VHH binding mode. J. Biol. Chem. 284:30718-30726. Résumé
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  219. Siponen, M., S. Spinelli, S. Blangy, S. Moineau, C. Cambillau et V. Campanacci. 2009. Crystal structure of a chimeric receptor binding protein constructed from two lactococcal phages. J. Bacteriol. 191:3220-3225.Résumé
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  225. Sun, X., D. van Sinderen, S. Moineau et K.J. Heller 2009. Impact of lysogeny on bacteria with a focus on lactic acid bacteria. Dans: Con temporary Trends in Bacteriophage Research. Nova Science Publishers, Inc. pp. 309-336.
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  231. Garneau, J.E., D.M. Tremblay et S. Moineau. 2008. Characterization of 1706, a virulent phage from Lactococcus lactis with similarities to prophages from other Firmicutes. Virology. 373:298-309. Résumé
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  233. Horvath, P., D.A. Romero, A.-C. Coûté-Monvoisin, M. Richards, H. Deveau, S. Moineau, P. Boyaval, C. Fremaux et R. Barrangou. 2008. Diversity, activity and evolution of CRISPR loci in Streptococcus thermophilus. J. Bacteriol. 190:1401-1412. Résumé
  234. Vaillancourt, K., N. Bédard, C. Bart, M. Tessier, G. Robitaille, N. Turgeon, M. Frenette, S. Moineau et C. Vadeboncoeur. 2008. Role of galK and galM in galactose metabolism by Streptococcus thermophilus. Appl. Environ. Microbiol. 74:1264-1267. Résumé
  235. Suárez, V., S. Moineau, J. Reinheimer et A. Quiberoni. 2008. Argentinean Lactococcus lactis bacteriophages: genetic characterization and adsorption studies. J. Appl. Microbiol. 104:371-379. Résumé
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  242. Robitaille, G., S. Moineau, D. St-Gelais, C. Vadeboncoeur et M. Britten. 2007. Galactose metabolism and capsule formation in a recombinant strain of Streptococcus thermophilus with galactose-fermenting phenotype. J. Dairy Sci. 90:4051-4057. Résumé
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  244. Fortier, L.-C., A. Bransi et S. Moineau. 2006. Genome sequence and global gene expression of Q54, a new phage species linking the 936 and c2 phage species of Lactococcus lactis. J. Bacteriol. 188:6101-6114. Résumé
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  247. Spinelli, S., V. Campanacci, S. Blangy, S. Moineau, M. Tegoni et C. Cambillau. 2006. Modular structure of the receptor binding proteins of Lactococcus lactis phages: The RBP structure of the temperate phage TP901-1. J. Biol. Chem. 281:14256-14262. Résumé
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  252. Donovan, D.M., S. Dong, W. Garrett, G.M. Rousseau, S. Moineau et D.G. Pritchard. 2006. Peptidoglycan hydrolase fusions maintain their parental specificities. Appl. Environ. Microbiol. 72:2988-2996. Résumé
  253. Donovan, D.M., J. Foster-Frey, S. Dong, G. Rousseau, S. Moineau et D.G. Pritchard. 2006. The cell lysis activity of the endolysin from the Streptococcus agalactiae bacteriophage B30 relies on the CHAP endopeptidase domain. Appl. Environ. Microbiol. 72:5108-5112. Résumé
  254. Robitaille, R., S. Moineau, D. St-Gelais, C. Vadeboncoeur et M. Britten. 2006. Detection and quantification of capsular exopolysaccharides from Streptococcus thermophilus using lectin probes. J. Dairy Sci. 89 :4156-4162. Résumé
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  257. Capra, M.L., A.L. Quiberoni, H.-W. Ackermann, S. Moineau et J.A. Reinheimer. 2006. Characterization of a new virulent phage (MLC-A) of Lactobacillus paracasei. J. Dairy Sci. 89:2414-2424.Résumé
  258. Duplessis, M., W.M. Russell, D.A. Romero et S. Moineau. 2005. Global gene expression analysis of two Streptococcus thermophilus bacteriophages using DNA microarray. Virology. 340:192-208. Résumé
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  264. Cochu, A., D. Roy, K. Vaillancourt, J.-D. LeMay, I. Casabon, M. Frenette, S. Moineau et C. Vadeboncoeur. 2005. The doubly phosphorylated form of HPr, HPr(Ser-P)(His-P), is abundant in exponentially growing cells of Streptococcus thermophilus and phosphorylates the lactose transporter LacS as efficiently as HPr(His-P). Appl. Environ. Microbiol. 71:1364-1372. Résumé
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  267. Lute, S., H. Aranha, D. Tremblay, D. Liang, H.-W. Ackermann, B. Chu, S. Moineau et K. Brorson. 2004. Virus-retentive filter nomenclature: Characterization of the coliphage PR772 recommended for virus filter performance testing. Appl. Environ. Microbiol. 70:4864-4871. Résumé
  268. Vaillancourt, K., J.D. LeMay, M. Lamoureux, M. Frenette, S. Moineau et C. Vadeboncoeur. 2004. Characterization of a galactokinase-positive recombinant strain of Streptococcus thermophilus. Appl. Environ. Microbiol. 70:4596-4603. Résumé
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  273. Lessard, C., A. Cochu, J.-D. Lemay, D. Roy, K. Vaillancourt, M. Frenette, S. Moineau et C. Vadeboncoeur. 2003. Phosphorylation of Streptococcus salivarius lactose permease (LacS) by HPr(His~P) and HPr(Ser-P)(His~P) and the effect on growth. J. Bacteriol. 185:6764-6772. Résumé
  274. Harel, J., G. Martinez, A. Nassar, H. Dezfulian, S. J. Labrie, R. Brousseau, S. Moineau et M. Gottschalk. 2003. Identification of an inducible bacteriophage in a virulent strain of Streptococcus suis serotype 2. Infect. Immun. 71:6104-6108. Résumé
  275. Cochu, A., C. Vadeboncoeur, S. Moineau et M. Frenette. 2003. Genetic and biochemical characterization of the phosphoenolpyruvate : glucose/mannose phosphotransferase system of Streptococcus thermophilus.Appl. Environ. Microbiol. 69:5423-5432. Résumé
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  282. Vaillancourt, K., S. Moineau, M. Frenette, C. Lessard et C. Vadeboncoeur. 2002. The galactose and lactose genes from the galactose-positive bacterium Streptococcus salivarius and the phylogenetically related galactose-negative bacterium Streptococcus thermophilus: organization, sequence, transcription, and activity of the gal gene products. J. Bacteriol. 184:785-793. Résumé
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